CDS

Accession Number TCMCG066C21904
gbkey CDS
Protein Id XP_034597605.1
Location complement(join(41559553..41559762,41559844..41559904,41560133..41560212,41560302..41560370,41560470..41560603,41560911..41561070,41561172..41561243,41561750..41561883,41562018..41562153,41562794..41562928,41563037..41563048))
Gene LOC117858611
GeneID 117858611
Organism Setaria viridis

Protein

Length 400aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034741714.1
Definition sorting nexin 1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category U
Description Vps5 C terminal like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17917        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005771        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006623        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006892        [VIEW IN EMBL-EBI]
GO:0006896        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0008333        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009958        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010252        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030904        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031902        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032588        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCTCGCCGGAGAGGAGCCCGTCGCAGAGTCCGCGGTCGCCGGCGGCGGCGGCGGGGGCGCCGTTCCTGTCGATCTCCGTCACGGATCCCGTCAAGATGGGCACCGGCGTGCAGGCATACATCTCCTACCGCGTCTTCACCAAGACCAACTTGCCTGAATTTGAGGGACCAGAGAAAATTGTTATTCGACGCTATAGTGATTTTGAATGGTTGCATGATAGGCTTGCTGAGAGGTACAAAGGCATTTTTATACCTCCCCTTCCAGAGAAGAATGCTGTTGAGAAATTCCGTTTTAGCAAGGAGTTCATTGAATTGCGGCGTCAAGCTCTGGACTTATTCATTAACAGGATAGCTTCACACCCTGAGCTCAAGCAAAGTGAAGTCTTGAGGGTATTTTTGCAGGCAGATGAAGAGAAAATGGATAGGGCAAGGTCTTATGAGACTGGTATTTTTAAGAAGCCATCAGATTTCTTACAGATGTTTAAGGATGTACAGTCAAAAGTCAGTGATGTTGTTCTGGGAAAAGAAAAGCCAGTGGAGGAATCTACTCCTGAGTATGAGAAGCTTAAAAATTACATATTTGAACTAGAAAATCATTTAGCAGAGGCACAGAAACAAGCATACCGTCTTGTGAAAAGACACAGAGAACTTGGGCAATCTTTGGCGGAATTTGGAAAGGCGATTAAGCTTTTAGGCGCTTGTGAAGGAGATGTGATGGAAAAGGTGTTTTCTGAAGTTGGTTCTAAGTCAGAGATGTTGTCAATAAAGTTGCAAAGAGAGGCAGACAATCTTCTCTTTAACTTTGAAGAACCATTGAAAGATTATGTGCGGGCTGTACAATCTATAAAAGCCACCATGATGGATCGAGCCAATGCTTTCAGGCAGCACTTTGATTTGGATCAGGAGAGGAAGTATAAAGAGCTTAACCTTGAAAAATTGAAGTTCATGAACCCTGAGAAATATGCCGAAGCAGAATTTGAGTTTAGAGAGTTGAAAGCAGACAGCGAGGAGGCTACGAAGAAGTTTGAACACATAGTTAGAATAATGAATGAAGAACTCGCTCGTTTCCAGGAGCAAAAAACAGCTGATATCGGACTTGCGTTCCATGAATTTGCCAAAGGGCAGGCTAAGCTAGCCAAAGACATAGCTGATGCATGGCGCAGCATCCTCCCAAAGCTGGAAGCTTGTTCGTCATCATAA
Protein:  
MISPERSPSQSPRSPAAAAGAPFLSISVTDPVKMGTGVQAYISYRVFTKTNLPEFEGPEKIVIRRYSDFEWLHDRLAERYKGIFIPPLPEKNAVEKFRFSKEFIELRRQALDLFINRIASHPELKQSEVLRVFLQADEEKMDRARSYETGIFKKPSDFLQMFKDVQSKVSDVVLGKEKPVEESTPEYEKLKNYIFELENHLAEAQKQAYRLVKRHRELGQSLAEFGKAIKLLGACEGDVMEKVFSEVGSKSEMLSIKLQREADNLLFNFEEPLKDYVRAVQSIKATMMDRANAFRQHFDLDQERKYKELNLEKLKFMNPEKYAEAEFEFRELKADSEEATKKFEHIVRIMNEELARFQEQKTADIGLAFHEFAKGQAKLAKDIADAWRSILPKLEACSSS